The Wide-Ranging Effects Of Nucleoside
Analogs
A Look at Mitochondrial Toxicity
Dave Gilden
September
25, 1999: A group of French doctors
report on five cases of a rare syndrome of cerebral, neurologic, and/or retinal damage
in 8 of 2,000 babies born to HIV positive mothers. This large mother-child cohort
had received AZT (Retrovir) or AZT/3TC (Epivir) to prevent HIV transmission during
pregnancy and delivery. The babies also displayed a variety of other abnormalities
in muscle, heart, pancreas, and bone marrow activity. Underlying defects in energy
production also were apparent. Two of the babies died after about a year. All were
HIV negative.
October 14, 1999: U.S. Bioscience announces the
termination of a trial of their experimental nucleoside analog or nucleoside reverse
transcriptase inhibitor (NRTI) lodenosine because of "serious adverse events." On
October 11, one of the trial participants died due to a striking liver failure syndrome
that continued to worsen for a month after he had stopped taking lodenosine.
Three similar deaths occurred in the seven weeks after the remaining trial participants
were taken off lodenosine. Another nine persons had to be hospitalized for monitoring
and treatment. In all, 75 trial participants exhibited some sign of liver damage in
blood tests.
November 11, 1999: After U.S. Food and
Drug Administration (FDA) prodding, Bristol-Myers Squibb sends physicians a letter
warning about the dangers of combining three of their HIV treatments: d4T (Zerit),
ddI (Videx), and hydroxyurea (Hydrea). The FDA also requires that Bristol-Myers emphasize
the warnings about pancreatitis (inflammation of the pancreas) in the ddI package
insert.
These notices followed two cases of fatal pancreatitis in the National Institutes
of Health (NIH)-sponsored trial ACTG (AIDS Clinical Trials Group) 5025 as well as
two other pancreatitis-related deaths in two separate industry-sponsored trials. All
four of the deceased had been taking ddI plus d4T, but only the ACTG 5025 volunteers
were also taking hydroxyurea. Inflammation of the pancreas, which secretes fat-digesting
enzymes as well as the hormone insulin, is an occasional serious side effect of ddI.
As with neuropathy (nerve disease characterized by numbness, tingling, and/or pain
in the hands or feet), which is another but a less serious ddI side effect, combining
ddI with certain other drugs raises the frequency of pancreatitis. D4T and ddI have
similar, reinforcing side effects while hydroxyurea acts by enhancing ddI's potency
within cells.
December 3, 1999: Gilead Sciences announces they
are terminating development of adefovir, a nucleotide analog -- the first HIV
treatment to be rejected by the FDA. Adefovir dosage causes progressive kidney failure
in many people after six months on treatment. Kidney damage is first indicated by
the appearance of protein in the urine. About one-half of the people taking the drug
for a year exhibit serious loss of kidney function, which is marked by high serum
creatinine (a metabolic waste product of muscle activity), and low serum phosphate
and bicarbonate. Fanconi's syndrome, marked by low potassium, may be life-threatening.
Despite these problems, adefovir is still being studied today, as a possible treatment
for hepatitis B (HBV) infection, but at a much lower, 10 mg dose; the anti-HIV trials
used 120 mg and 60 mg doses.

Mitochondrial Biology
These incidents are but the latest chapters in a long story. Almost
since AZT was introduced in 1987, scientists have recognized that several
drugs in the NRTI class are not very specific; they block the growth of
HIV but they also can be toxic to human cells, sometimes with
life-threatening consequences.
NRTIs including ddI, d4T, lodenosine, and adefovir work against HIV by
disrupting the function of the virus's reverse transcriptase enzyme, which
converts the HIV gene set into a DNA form that inserts itself into human
cell genomes. Nucleoside analog drugs are essentially defective versions
of natural nucleosides (precursor compounds). Natural nucleosides are
first phosphorylated (chemically reconfigured) into nucleotides and then
chained together to form DNA; this is done by both reverse transcriptase
and the cells' own enzymes during gene replication. The chemical
structures of NRTIs lack the necessary molecular hooks to continue this
process; they terminate the chain being constructed by reverse
transcriptase and block the infection of new cells.
NRTIs generally do not affect construction of new DNA in the nuclei
(center) of somatic (body) cells because the enzymes that drive this
process in the cells have a "proofreading" mechanism that snips out the
nucleoside analogs if they are inserted into a new DNA chain. There is an
exception to this rule, though: the cells' weak point lies in the
mitochondria, the energy-producing components of the cell.
Eons ago, at the dawn of evolution, mitochondria apparently were
independent bacteria-like cells. At some point, they took up abode in
larger, more advanced cells with nuclei and entered into a symbiotic
relationship. Today mitochondria retain some autonomy within nearly all
nonbacterial cells. These organelles, which are small pouches of deeply
folded membranes, break down sugar and fat to create energy that the cell
can use for its myriad chemical processes.
Hundreds of mitochondria exist in each cell and replicate independently
of the cell's own proliferation. The existing mitochondria are doled out
to the daughter cells during mitosis (cell division); the mitochondria
then replicate in each cell according to the cell's energy needs. Yet
despite their integral role within cells, mitochondria retain certain
unique genes that govern the production of a very small amount of proteins
and enzymes. Two to ten redundant copies of the mitochondrial genome exist
within each mitochondrion in the form of circular double-stranded DNA.
Mitochondrial genes are particularly prone to damage. DNA polymerase
gamma, the enzyme that directs replication of the mitochondrial genes, is
more primitive than the DNA polymerase enzymes found in the cell nucleus.
Polymerase gamma has no "proofreading" function, so little repair of
errors occurs when stringing nucleotides together. Nucleoside analogs
therefore inhibit DNA polymerase gamma in the same way they do reverse
transcriptase.
Mitochondria rely on their genetic redundancy to protect against errors
in their genes. Defective DNA coexists and replicates alongside correct
DNA, which covers for the defect. Similarly, functional mitochondria can
compensate for defective mitochondria within the same cell.
The system breaks down only when damaged mitochondrial DNA reaches a
threshold proportion somewhere above 70%. Cells then begin to suffer from
energy deficiencies and turn increasingly to anaerobic processes (i.e.,
without using oxygen) outside the mitochondria. Anaerobic respiration is
much less efficient than mitochondria's oxidative phosphorylation (use of
oxygen to break down sugar and fat); furthermore, it causes the production
of lactic acid, a substance that reduces the normal pH of blood.
The oxidative process in mitochondria also gives rise to toxic
byproducts. These are reactive oxygen species (ROS), which are highly
reactive forms of oxygen (O2-, H2O2, and OH-). ROS damage DNA and other molecules;
they are produced when energy production is inhibited mid-stage.
Antioxidant molecules (superoxide dismutase and glutathione) within
mitochondria are supposed to eliminate ROS by reducing them to water while
transferring their extra electrons to metals. However, this process is not
always effective enough to prevent oxidative stress (increased levels of
free radicals and other molecules, resulting in cell damage). A gradual
buildup of dysfunctional mitochondria due to ROS reactions with
mitochondrial DNA is thought to be one of the processes central to
aging.

Mitochondrial Toxicity of NRTIs
Specific disease syndromes are also connected with rare inherited mitochondrial mutations.
Mitochondria-related diseases vary in severity from person to person, and symptoms
frequently appear only as a person ages. Tissues such as muscles and nerves, which
require high levels of energy, are most often involved. Some of the specific conditions
related to inadequately low mitochondrial activity are muscle wasting (myopathy);
heart failure (cardiomyopathy); peripheral numbness and pain (neuropathy); generalized
loss of the kidney's ability to filter the blood (proximal renal tubular dysfunction
or Fanconi-like syndrome); low blood cell counts (anemia, leukopenia, thrombocytopenia,
or pancytopenia); swelling and fatty degeneration of the liver (hepatomegaly with
steatosis); and pancreatic inflammation (pancreatitis). Fatigue, psychological depression,
and high lactic acid levels (lactic acidosis) are more generalized signs.
Researchers reported a connection between myopathy and AZT in 1990. A year later
an article was published associating AZT with heart muscle damage in particular. Other
signs of mitochondrial toxicity were associated with NRTIs in the years that followed.
Why different NRTIs have different effects and why different individuals have varying
sensitivity to those effects are currently unknown. The variations between individuals
may relate to the mitochondrial mutations already present and to their distribution
in various organs, which is not necessarily uniform.
The varying sensitivity of different tissues to specific NRTIs presumably arises
from variations in the penetration of those drugs in different cells and the energy
requirements of those cells. For example, adefovir selectively and severely affects
kidney cells because it binds to a kidney cell transporter molecule (hOAT1). This
binding causes adefovir to build up inside the cells lining the walls of renal tubules,
where unwanted compounds are transferred from the blood to the urine.
D4T and ddC represent two critical cases in which mitochondrial-associated toxicity
-- in these cases, neuropathy -- was noted to be so severe that dose levels had to
be greatly restricted during research and development. Both compounds originally tested
as highly potent antiretroviral agents. In the case of d4T, trials originally included
daily doses as high as 900 mg. Trial participants reported immediate improvements
in their health, but two-thirds were forced to quickly abandon the drug due to severe
neuropathy.
In the end, the committee monitoring the large d4T parallel track program found that
even 40 mg twice daily was too much; about a quarter of the persons taking that dose
quit the parallel track program because of neuropathy. The development of neuropathy
was noted to be mediated by CD4 cell count, i.e., the condition was more prevalent
among people with lower CD4 cell counts. Peripheral neuropathy also developed after
an average follow-up of 79 weeks in one-half of the participants in a d4T monotherapy
trial who were using 40 mg twice daily. Nonetheless, 40 mg twice a day became the
standard dose.
FDA-approved package inserts for all NRTIs carry a prominent warning that describes
the potential side effect of liver degeneration. Specifically, the inserts warn: "Lactic
acidosis and severe hepatomegaly with steatosis, including fatal cases, have been
reported with the use of nucleoside analogs alone or in combination … A majority
of these cases have been in women. Obesity and prolonged nucleoside exposure may be
risk factors." This hepatic degeneration resembles "acute fatty liver" of pregnancy,
a maternal syndrome that threatens both mother and fetus and results from an inherited
fetal inability to oxidize fatty acids in the mitochondria.
These warnings about liver degeneration are based on isolated incidents that were
reported to occur after drug approval. It is difficult to say how frequent
they are now. A 1989-1994 review of persons seen at Johns Hopkins' HIV Clinic recorded
an incidence of 1.3 per 1,000 person-years of severe cases of hepatomegaly with steatosis
and lactic acidosis. (The number of persons multiplied by the number of years equals
person-years; e.g., one person followed for ten years equals ten person-years and
ten persons followed for one year also equals ten person-years.) A more recent French
study found a frequency of 8.4 per 1,000 person-years for symptomatic high lactic
acid levels.
In the case of ddI, the incidence of severe pancreatitis has decreased in recent
years as people's overall health has improved with the success of potent anti-HIV
regimens. Frequent monitoring should be done to detect the presence of pancreatic
enzymes in the blood -- an early sign of possibly developing pancreatitis. Sometimes,
however, this condition develops rapidly and without forewarning; doctors therefore
should not let their guard down. Somewhat alarmingly, the precise risk factors predisposing
an individual on ddI to pancreatitis, as with other mitochondrial toxicities, remain
unexplored. The effects of combining ddI with other drugs such as d4T and hydroxyurea
also have come as a surprise. Even more surprising is that this situation emerged
after a decade of testing and marketing ddI. Overall, more adverse effects
are seen in the setting of alcohol abuse.
NRTIs rarely inflict severe mitochondrial damage -- with a few exceptions, notably
adefovir's impairment of the kidneys; ddI, d4T and ddC's neuropathy; and high-dose
AZT's anemia. Frequent monitoring of organ function through lab tests (specifically,
tests of liver function, phosphorus, and carbon dioxide, as well as complete blood
counts) usually can prevent serious outcomes. Monitoring serum lactate, while somewhat
difficult because the test must be conducted immediately after blood is drawn, may
also be useful, as indicated by one recent, preliminary report by Marianne Harris,
MD, from the British Columbia Centre for Excellence in HIV/AIDS. Also, stopping the
drugs commonly results in gradual recovery, probably because mitochondrial replication
restores energy production. However, the FDA continues to receive reports of deaths
from lactic acidosis, although mild increases in lactic acid levels that result in
fatigue may be much more common than life-threatening cases.

New Long-Term Mitochondrial Toxicities
After a decade's experience with one NRTI or another, there are now three or four
potent, well-established drug combinations that include protease inhibitors (PIs)
or non-nucleoside reverse transcriptase inhibitors (NNRTIs). Combining these drugs
also combines their toxicities in new and unfamiliar ways. More importantly, antiviral
drugs are now being taken for much longer periods of time than in the past. With durable
suppression of HIV caused by highly active antiretroviral therapy (HAART), the health
of the individual has stabilized but residual HIV survives (see "HIV
Persists despite HAART," Spring 2000 BETA). Not only is this a new era
in HIV therapy; it is a new era with regard to long-term toxicities.
Chronic, unsuppressed HIV infection has long been known to trigger a wasting syndrome
in which people with HIV lose lean tissue mass (mostly muscle), sometimes to a life-threatening
extent. Some researchers have noted that subcutaneous (under the skin) fat loss accompanies
the loss of lean tissue, especially in women and overweight men. The worst deficit,
it appears, has been an inability to regain lean mass lost during severe opportunistic
infections (OIs).
Today, some people taking HAART have trouble maintaining or restoring proper fat
distribution. Fat tends to accumulate over time around the central organs and sometimes
around the back or front of the neck. Meanwhile, lipoatrophy -- the depletion of subcutaneous
fat stores, especially in the limbs and cheeks -- continues.
This widespread body fat rearrangement, affecting up to two-thirds of participants
in various studies, has been a curious phenomenon (see "Body
Fat Changes: More than Lipodystrophy," January 1999 BETA, and "HAART
Attack: Metabolic Disorders during Long-Term Antiretroviral Therapy," April
1999 BETA). It was assumed at first that the new PIs were responsible for this
"lipodystrophy" (now sometimes also referred to as HARS, HIV-Associated Adipose Redistribution
Syndrome).
After the first flood of reports, physicians began to recall that they had seen some
cases of fat accumulation at the base of the neck and between the shoulder blades
(dorsocervical fat pads, commonly called "buffalo humps") in the pre-HAART days. This
buildup sometimes was accompanied by lipoatrophy. In addition, there is a marked similarity
between HAART-associated lipodystrophy and a form of multiple symmetrical lipomatosis
(abnormal fat accumulations), also known as MSL or Madelungs disease. Both syndromes
involve peripheral fat loss and buffalo humps. Persons with MSL do not have fat deposits
in the torso, but they do exhibit neuropathy. Several reports indicate that mutations
at a particular point in the mitochondrial DNA accompany MSL.
A recent survey of body fat abnormalities in Australia's HIV positive population
recorded an overall prevalence of 54%, including 63% of those who had taken PIs and
32% of those with exposure to treatments that did not include PIs. The same research
group, headed by Andrew Carr, MD, and David Cooper, MD, of St. Vincent's Hospital
in Sydney, went on to compare 14 men receiving NRTIs only who were experiencing peripheral
fat loss with or without fat accumulation with three different control groups without
lipodystrophy. These three control groups were comprised of 32 treatment-naive men,
28 men on NRTIs only, and 44 men receiving NRTIs plus PIs. A fourth comparison group
contained 102 men with lipodystrophy who were taking both NRTIs and PIs.
The NRTI-only cases of lipodystrophy were distinguished by higher lactic acid levels,
which correlated with losses in body weight and signs of liver dysfunction. These
signs included swollen livers and elevated liver enzymes in the blood, all of which
are suggestive of mitochondrial toxicity.
Liver toxicity has particular implications for aggravating mitochondrial toxicity,
since one of the roles of the liver is to remove lactic acid from the blood. Liver
function is critical for fat metabolism, too, given that organ's central role in converting
excess blood lipids (fats) into glucose (sugar) or vice versa as required by the body's
activity level and dietary intake. PIs can lead to high lipid and insulin levels.
Recent weight loss, fatigue, and nausea were significantly more common in the Australians'
NRTI lipodystrophy group than in the combined therapy lipodystrophy group. The lipodystrophic
men on PIs had higher blood levels of lipids (cholesterol and triglycerides), glucose,
and insulin than did their counterparts on NRTIs only.
Body shape alterations were similar in the two groups. However, in a study done in
France by L. Maulin, MD, and colleagues, this was not the case. The French researchers
found that those on PI-containing regimens had markedly more visceral (abdominal)
fat than those either on NRTIs only or taking no anti-HIV drugs. Both the protease
and nucleoside groups had about the same amount of subcutaneous fat, which was substantially
less than in the treatment-naive group.

Risk Factors
Significant risk factors for lipodystrophy in the Australian study included current
use of d4T and the number of years on any NRTI. Each year of NRTI use increased the
risk of lipoatrophy 1.26-fold. In contrast, each year of PI use trebled the risk of
any form of lipodystrophy. Discontinuing NRTIs led to reductions in blood lactic acid
and liver enzymes, nausea, and fatigue, but lost weight was not recovered (over an
average four months of follow-up).
The French study also showed a strong association between lipoatrophy and d4T. In
1999, the same researchers reported on what happened when 29 persons with peripheral
fat wasting were taken off d4T and switched to another drug(s). Fourteen who were
also receiving a PI changed from d4T to AZT or abacavir (Ziagen). The rest replaced
their d4T-containing NRTI regimen with AZT/3TC/nevirapine (Viramune). After six months,
blood triglyceride levels decreased by approximately 40% in both groups while subcutaneous
fat rose 40%.

Problems Ranking the NRTIs
Glaxo Wellcome, the maker of AZT, 3TC, and abacavir, is quick to point to such studies.
Whether d4T is especially culpable in lipoatrophy has yet to be decisively documented,
however. Most persons on d4T have taken AZT previously and have lived longer with
HIV infection.
Likewise, laboratory studies that attempt to rank the different NRTIs' respective
mitochondrial toxicity are open to question since they may not reflect what happens
in living cells in the body. There, toxicity is determined not just by the drugs'
chemical inhibition of DNA polymerase gamma, but also by the concentration of each
compound within mitochondria and the ease with which it is activated via phosphorylation
(addition of a phosphate group) before DNA polymerase can process it.
The energy demands of cells in the body, for which they rely on their mitochondria,
are yet another decisive factor in eliciting the NRTIs' inhibition of mitochondrial
activity. Gender and HIV infection itself are major factors that influence the metabolic
and, hence, the energy profile of cells throughout the body.

Beyond DNA
NRTIs also may have other effects on mitochondrial metabolism besides interference
with DNA replication. For example, while lodenosine seemed to have little effect on
mitochondrial DNA in lab tests, it causes serious heart toxicity in mice and fatal
liver toxicity in humans in a way that resembles mitochondrial failure. This NRTI
in fact does disrupt mitochondrial functioning, as evidenced by the heightened lactic
acid levels and death in laboratory cell lines exposed to it. According to Yung-chi
Cheng, a Yale University researcher who did the original mitochondrial assays on lodenosine,
its toxic effect probably results from inhibition of lactic acid dehydrogenase, an
enzyme that converts lactic acid into a compound that the mitochondria can oxidize.
A parallel situation exists for AZT, claims a recent study conducted in a laboratory
liver cell line by Jean-Pierre Sommadossi, PharmD, and colleagues from the University
of Alabama. Unlike ddC and ddI, AZT did not inhibit mitochondrial DNA synthesis in
this case, but AZT increased lactic acid production in cell cultures whereas other
NRTIs did not. The researchers found that exposure to AZT directly reduced the activity
of several of the mitochondria's major energy-producing enzymes. This was thought
to be the reason for the contradictory results.

Contributing Toxicities
At this past spring's Keystone Symposium on New Biological Approaches to HIV-1 Infection,
Scott Raidel of the Department of Pathology at Emory University showed striking photos
of mitochondria in the heart muscle of mice bioengineered to contain a gene for the
Tat protein of HIV; the mitochondria were extremely elongated and their internal structures
disrupted. That is, mice that were given genetic implants so that they developed higher
levels of the Tat protein were then observed to have significant mitochondrial damage.
Their DNA content was about 30% lower than in normal mice.
When NRTIs enter the body, they encounter an environment that may be already prone
to the type of mitochondrial damage that these drugs promote. Tat is a protein that
helps convert the HIV DNA genome within cells back into RNA for packaging in a new
generation of virions (complete virus particles). Among other things, it suppresses
the cells' antioxidant protective system, rendering them more sensitive to inflammatory
activation by such cytokines as tumor necrosis factor (TNF). (Cytokines are hormones
or messenger proteins that coordinate immune system responses.) Uninfected cells in
lymph nodes are chronically exposed to Tat and suffer the effects of oxidative stress.
Many die with swollen, effects.
One widely advertised agent that has some effect in countering the anemia associated
with certain NRTIs is erythropoietin (Procrit), a growth factor that stimulates red
blood cell production. Erythropoietin helps reverse anemia caused by AZT but has no
effect on other sources of fatigue, including muscle weakness or high lactic acid
levels associated with mitochondrial dysfunction. People taking erythropoietin must
continue to be monitored for such effects, and in some cases the offending drug still
must be stopped or changed.

Reversing or Preventing Mitochondrial Toxicities
There are some potential but poorly researched ways to counteract
mitochondrial toxicities. The agents involved are natural cofactors for
mitochondrial energy production, and supplying them might increase the
efficiency of that process. For example, there have been three individual
cases of treating severe lactic acidosis with large amounts of riboflavin
(vitamin B2),
a micronutrient that is commonly deficient in people with HIV. Other
suggested treatments along these lines have been coenzyme Q10 (an antioxidant) and
the vitamins B1 (thiamine), B12, and K.
Another agent that might reduce mitochondrial toxicity is replacement L-acetyl carnitine,
which is itself reduced by mitochondrial toxicity. L-carnitine is a product of protein
breakdown that is used to transport fat components into the mitochondria for oxidation.
L-acetyl carnitine, a variant of L-carnitine, shares this function and also helps
damaged nerve cells regenerate. One four-person study has now indicated that L-acetyl
carnitine promotes nerve growth and reduces symptoms in people with drug-related neuropathy.
(Note that L-acetyl carnitine is not the L-carnitine sold in health food stores.)
A previous Italian study, led by Andrea Cossarizza of the University of Modena, of
T-cells taken from people with primary (early) HIV infection found electric charge
alterations in mitochondrial membranes and noted a strong tendency for these cells
to undergo spontaneous cell death. In the test tube, L-acetyl carnitine, as well as
N-acetyl cysteine and nicotinamide (niacin, a B vitamin), was able to rescue the cells,
which correlated with the subjects' blood HIV and TNF levels. This association with
TNF suggested that the cell rescue involved a process that reversed oxidative stress.
A Spanish study, led by José Garcia de la Asunción and colleagues at the University
of Valencia, has tried a similar strategy using high doses of the antioxidant vitamins
C (1 g per day) and E (0.6 g per day). Chemical markers of muscle damage and oxidative
stress decreased in eight HIV positive persons on AZT plus the vitamins compared with
a control group on AZT alone. The same was true in a group of study mice. Examination
of the mitochondria in the mice's muscle cells further showed that the mice receiving
AZT plus the vitamins retained normally organized mitochondria whereas the mice on
AZT alone had swollen, disrupted mitochondria.

The Big Picture
Mitochondria play a vital role in the body's metabolism; protecting mitochondria
is essential to sustaining life. Although an abundance of research suggests that certain
NRTIs severely disrupt specific mitochondria, the exact significance and nature of
that toxicity requires further elucidation. Development of nontoxic treatments to
support energy production and of safer NRTIs is critically important. However, that
research is still in rudimentary stages and lacks substantial industry or government
support. Worse yet, the commercial implications of present NRTIs' mitochondrial toxicity
threaten to disrupt the objective scientific process.
Still, it should be noted that mitochondrial toxicity results at least in part from
the use of antiretroviral drugs -- and there are risks and benefits involved with
the use of most if not all drugs, not only anti-HIV medications. Simply put, when
the risks outweigh the benefits, the drug in question is not used; when the benefits
outweigh the risks, the drug is used. While further research and data may change the
risk-benefit ratio, the benefits for the vast majority of people with HIV whose lives
have been improved and extended through the use of antiretroviral therapy still far
outweigh the risks.
Dave Gilden is Director of Treatment Information Services at amfAR.

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